Have you tried MySQLTuner yet? It's free and it makes optimizing your MySQL server easier than ever!

If you need to enable SSL in ProFTPD, try this out:

<IfModule mod_tls.c>
TLSEngine on
TLSRequired off
TLSRSACertificateFile /etc/httpd/conf/ssl.crt/server.crt
TLSRSACertificateKeyFile /etc/httpd/conf/ssl.key/server.key
TLSVerifyClient off
</IfModule>

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